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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2291773 chr1:213061030 G/T LQK1 chr1:213029947-213031480:- 0.83 9.53 5.28E-13 Box Plot
ACC rs2292533 chr4:76861859 C/T NAAA chr4:76834810-76862204:- 0.52 5.36 1.97E-6 Box Plot
ACC rs2298746 chr11:74553834 C/T XRRA1 chr11:74518784-74660245:- 0.74 5.73 5.15E-7 Box Plot
ACC rs2302117 chr14:74454813 C/A LIN52 chr14:74551499-74667938:+ 0.59 6.23 8.25E-8 Box Plot
ACC rs2302118 chr14:74422329 G/C LIN52 chr14:74551499-74667938:+ 0.57 6.01 1.82E-7 Box Plot
ACC rs2303083 chr16:24835168 G/A SLC5A11 chr16:24857162-24922949:+ 1.02 5.24 2.91E-6 Box Plot
ACC rs2307355 chr7:99693552 C/T MBLAC1 chr7:99724317-99726121:+ 1.28 5.35 1.98E-6 Box Plot
ACC rs2338050 chr10:51804949 A/G FAM21A chr10:51827648-51893269:+ 0.69 6.54 2.63E-8 Box Plot
ACC rs2351010 chr5:96293929 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2351011 chr5:96251675 C/A ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs2359325 chr1:213066980 C/T LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs2380687 chr8:71680355 T/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs2394872 chr7:98212745 A/C TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs2408652 chr5:56271185 G/A C5orf35 chr5:56205103-56213010:+ 1.04 5.65 6.92E-7 Box Plot
ACC rs2419256 chr7:64471881 T/G INTS4L1 chr7:64601603-64694600:+ 0.71 5.2 3.36E-6 Box Plot